CDS
Accession Number | TCMCG066C14813 |
gbkey | CDS |
Protein Id | XP_034590129.1 |
Location | join(4461277..4461563,4462179..4462302,4462404..4462496,4462649..4463039,4463366..4463855,4463968..4467764,4467857..4467963,4468062..4468316,4468430..4469065,4469155..4469352,4469425..4469703,4469813..4470055,4470150..4470341) |
Gene | LOC117852234 |
GeneID | 117852234 |
Organism | Setaria viridis |
Protein
Length | 2363aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA633601 |
db_source | XM_034734238.1 |
Definition | pre-mRNA-processing-splicing factor 8A [Setaria viridis] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGTGGAACGGCGCGCCGCCTCCGCCGCCGCCGCACATGGCGGCGGCCCCGCCTCCTCCGGGCACGACGGGGGCCGGGGCAGGCCAGCCCCCGCCCCCGCCGCCGCCGGCCGGGGCGCCGCAGGGCGCCAAGCCGCTGACGCCGGCGGAGCTGGAGGCGCAGCTGGTGGAGAAGGCCCGCAAGTGGCACCAGCTCAACTCGAAGCGCTACGGAGACAAGCGCAAGTTTGGGTTCGTCGAGGCGCAGAAGGAGGACATGCCTCCTGAGCACGTCCGCAAAATCATCAGAGATCACGGAGACATGTCCTCCAAGAAGTACAGGCACGACAAGCGTGTTTATCTTGGAGCGCTCAAATTTGTGCCCCATGCTGTCTACAAACTACTGGAGAACATGCCAATGCCTTGGGAGCAGGTTCGGCATGTGAAAATTTTGTATCACATTACTGGGGCTATCACTTTTGTAAATGAAATCCCCTGGGTGGTGGAACCCATATACCTTGCACAGTGGGGTACAATGTGGATCATGATGCGGAGAGAGAAGAGGGATAGGCGGCATTTTAAACGAATGCGCTTTCCTCCATTTGATGATGAGGAGCCTCCACTGGACTATGCTGATAATCTGTTGGATGTTGAACCACTCGAGGCCATACAGTTGGAGTTGGACAGTGAAGAAGATGCAGCTGTATATGAATGGTTCTATGACCACAAGCCTCTTATGAAGACCAAGCTTATAAACGGCCCCAGCTACAGGAAATGGCATCTATCTCTTCCCATAATGGCAACACTATATCGCCTTGCTGGCCAGCTGTTGTCAGACCTGATTGATAGGAATTATTTCTACTTGTTTGATATGGAATCTTTCTTTACTGCCAAAGCACTAAATATGTGCATTCCAGGGGGTCCGAAGTTTGAACCGCTGTACCGTGATATGGAGAAGGGTGATGAGGACTGGAATGAGTTTAATGACATAAATAAACTCATCATACGTCAGCCACTTCGAACTGAGTATAGGATTGCTTTCCCTCATCTATACAATAACAGGCCAAGGAAAGTGAGACTTGGGATCTATCATACCCCCATGATAATGTATATCAAGACAGAGGATCCAGATTTGCCAGCATTCTACTATGATCCTCTGATAAATCCCATCACTTCAACTAACAAGGTTGATCGTCGGGAGAGGAAAGTAACCGAAGAGGATGATGATGAAGATTTTTGTCTCCCAGAAGACGTGGAACCTCTCTTGAAAAGCACTGAACTCTACACTGATACAACAGCCGCTGGTATATCATTGCTTTTTGCTCCAAAGCCTTTTAACATGCGATCTGGCAGAACACGTCGTGCAGAGGACATTCCTCTTGTATCGGAGTGGTTCAAGGAGCATTGCCCACCAGCTTATCCTGTGAAAGTTCGTGTGAGTTACCAGAAGCTGTTGAAGTGTTATGTACTCAATGAGCTACATCATAGGCCTCCCAAGGCTCAGAAAAAGAAGCATCTGTTCCGTTCACTCCAAGCAACAAAGTTTTTCCAAACTACTGAGCTTGACTGGGCGGAAGCAGGCCTGCAAGTTTGCAAGCAGGGGTACAACATGCTGAACTTGTTGATTCACAGGAAGAATCTTAACTATCTTCATTTAGACTACAATTTCAATTTGAAACCCGTGAAGACTCTTACAACAAAGGAAAGGAAAAAATCTCGTTTTGGAAATGCATTCCATCTGTGTCGTGAAATTTTACGACTTACTAAGTTGGTCGTTGATGCTAACATCCAGTTCCGTCTGGGAAATGTTGATGCTTTCCAGTTGGCAGATGGTCTGCAATACATATTCTCTCATGTTGGCCAGCTAACTGGTATGTATAGGTACAAGTACCGATTGATGAGGCAGATTAGGATGTGCAAGGATCTGAAGCACTTGATATATTACCGTTTCAACACTGGCCCTGTTGGAAAAGGACCTGGCTGTGGGTTTTGGGCTCCAATGTGGAGAGTGTGGCTCTTCTTCCTTCGCGGTATTGTCCCATTATTGGAGCGCTGGTTGGGTAATTTGTTGGCAAGGCAGTTTGAGGGTCGGCATTCGAAGGGAGTAGCCAAAACCGTAACAAAGCAACGTGTTGAGTCTCATTTTGATTTGGAGCTTCGTGCTGCAGTTATGCACGATGTTCTAGATGCTATGCCAGAGGGCATCAAACAAAACAAGGCCCGGACTATATTACAGCATCTTAGTGAGGCATGGCGATGCTGGAAGGCAAATATCCCATGGAAAGTCCCTGGCCTACCTGTGCCTATTGAGAACATGATTCTTCGTTATGTGAAGTCAAAGGCAGATTGGTGGACGAATGTTGCTCATTACAACCGTGAGCGTATCAGGCGTGGTGCTACAGTTGACAAGACTGTTTGTCGGAAAAATCTTGGAAGGTTAACTCGTCTATGGCTGAAGGCAGAACAAGAGAGGCAACACAATTACCTGAAAGATGGGCCATATGTAACTCCTGAGGAAGCTGTTGCTATTTATACAACAACAGTTCACTGGCTGGAATCAAGGAAGTTCTCACCAATTCCTTTTCCGCCACTATCATACAAGCATGACACCAAACTTCTTATACTTGCACTGGAAAGGCTGAAGGAGTCATACAGTGTAGCAGTTAGGTTGAACCAACTGCAGCGGGAGGAGCTTGGGTTGATTGAACAGGCTTACGATAATCCACACGAAGCACTGTCAAGGATAAAAAGGCATCTTCTTACTCAGCGGGCGTTCAAAGAAGTTGGCATAGAATTCATGGACTTATACAGCTACTTGATCCCAGTATATGAAATCGAACCTCTTGAAAAAATCACTGATGCATACCTTGACCAGTACTTGTGGTACGAGGGGGACAAACGCCATCTCTTCCCAAATTGGGTGAAGCCTGCTGATTCTGAACCACCACCTCTACTTGTTTATAAATGGTGCCAGGGCATAAACAATTTACAGGATGTATGGGACACAAGTGATGGACAGTGTGTTGTGATGCTCCAGACAAAATTTGAGAAGTTCTTTGAAAAAATTGATCTGACACTGTTGAACAGGCTTCTTCGGTTGGTCTTAGATCATAACATAGCTGATTATGTTACTGCAAAGAACAATGTTGTGTTGTCTTACAAGGACATGAGCCACACAAATTCTTATGGTCTCATTCGAGGGCTTCAGTTTGCATCTTTCGTTGTTCAGTATTATGGCCTTGTGCTGGATCTCCTGATTCTCGGTCTAACACGTGCAAGTGAGCTTGCTGGGCCACCTCAGATGCCAAATGAGTTCCTTACATATGCTGACACAAAAATTGAGACAAGGCATCCCATCAGATTGTATTCTCGATATATTGACAAGGTGCACATATTGTTCCGCTTCACTCATGAGGAAGCGCGAGATCTAATTCAGCGGTACTTGACAGAACATCCTGATCCTAACAATGAGAACATGGTTGGCTACAATAACAAGAAATGTTGGCCTAGAGATGCAAGAATGAGGCTGATGAAACATGATGTAAATCTTGGAAGAAGTGTGTTCTGGGATATGAAGAACCGCCTTCCACGGAGTATTACAACCTTAGAATGGGAGAATAGCTTTGTCTCTGTTTACAGCAAGGACAATCCAAACCTGCTTTTTAGCATGTGTGGGTTTGAAGTCCGTATACTGCCAAAGATACGAATGACTCAGGAGGCATTCAGCAACACAAAGGATGGAGTATGGAATTTGCAGAATGAACAGACAAAAGAAAGGACAGCAATTGCCTTTCTGAGAGTCGATGATGAGCATATGAAGGTGTTTGAGAACCGTGTTAGGCAGATTCTAATGTCATCAGGGTCAACAACATTCACCAAGATAGTCAACAAGTGGAATACTGCTCTCATTGGCCTTATGACATATTTCCGCGAAGCAACAGTCCATACGCAGGAGCTTTTGGATTTACTTGTCAAATGTGAAAACAAGATCCAGACTCGTATAAAGATTGGCCTGAATTCAAAGATGCCTAGTAGGTTTCCTCCTGTCATCTTCTATACACCTAAGGAAATTGGAGGTCTAGGAATGCTGTCGATGGGTCATATTCTTATACCACAAAGCGATCTTAGGTACAGTAAGCAGACAGATGTTGGTGTAACACATTTCCGAAGTGGTATGAGCCATGAAGAGGACCAGCTTATTCCTAACTTGTATCGCTACATCCAGCCATGGGAGAGTGAGTTTATTGATTCACAGCGTGTTTGGGCTGAGTATGCTTTGAAGAGGCAGGAAGCACAATCTCAAAACAGACGGTTGACCCTTGAGGATCTTGAAGACTCATGGGATAGAGGTATACCTCGTATCAACACTCTTTTCCAAAAGGACCGCCATACGCTAGCCTATGATAAAGGATGGAGAGTGAGAACAGATTTTAAGCAATATCAAGTGCTGAAACAGAACCCATTCTGGTGGACACATCAGCGGCATGATGGGAAGCTTTGGAACCTAAATAACTACAGAACTGATGTCATTCAAGCGCTTGGTGGTGTAGAAGGTATCCTGGAACATACATTATTTAAAGGAACTTATTTCCCTACCTGGGAGGGTCTGTTTTGGGAGAAGGCATCAGGTTTCGAAGAGTCTATGAAATACAAGAAACTGACAAATGCACAGCGTTCTGGGCTCAATCAAATCCCCAATCGAAGATTTACCCTGTGGTGGTCACCAACCATCAATCGTGCAAACGTGTATGTTGGTTTCCAGGTCCAGCTAGATCTTACGGGGATATTCATGCACGGGAAAATTCCCACATTGAAGATTTCTCTGATCCAGATCTTCCGTGCACATCTGTGGCAGAAGATACATGAAAGTGTTGTTATGGATCTTTGCCAAGTTTTGGACCAAGAGTTGGATGCACTGGAGATCGAGACTGTACAGAAAGAGACAATACATCCCAGGAAGAGTTACAAGATGAACAGTTCATGCGCAGATATCCTCCTCTTTGCTGCACACAGATGGCAGATGTCAAAACCAAGCTTAGTTTCTGAGTCGAAGGATCTCTTCGATCAGAAAGCAAGTAACAAGTATTGGATTGATGTTCAACTGCGTTGGGGAGATTATGATTCGCATGACATAGAACGTTATACAAGAGCCAAGTTCATGGATTACACAACAGACAATATGTCCATCTACCCATCACCTACTGGGGTGATGATTGGAATTGATCTAGCGTATAATTTGCACTCCGCTTTTGGCAACTGGTTCCCTGGGTCAAAGCCCCTACTTCAGCAAGCAATGAACAAGATCATGAAGTCAAATCCTGCTCTGTATGTGCTGAGGGAGAGGATAAGGAAGGGTCTGCAGTTGTACTCATCTGAACCCACTGAACCATATCTGTCTTCACAAAACTATGGAGAGATCTTCAGCAATCAAATCATATGGTTTGTGGATGATACAAATGTGTATCGAGTCACTATTCACAAAACTTTTGAGGGTAACTTGACCACAAAACCAATCAACGGTGCTATTTTCATTTTCAATCCAAGAACTGGTCAACTTTTCCTTAAGGTTATCCACACAAGTGTATGGGCGGGGCAAAAGCGTCTTGGACAGCTGGCCAAGTGGAAAACAGCTGAGGAGGTTGCTGCATTGGTTCGATCTCTGCCTGTAGAAGAGCAGCCAAAGCAAATTATTGTGACAAGGAAGGGCATGTTGGATCCATTGGAGGTCCATCTACTCGACTTCCCTAACATTGTTATCAAGGGCAGTGAGCTGCAACTTCCTTTCCAGGCTTGCTTAAAGATTGAGAAGTTTGGTGATCTTATTCTGAAGGCAACTGAACCACAGATGGTTCTTTATAATATATATGATGATTGGTTGAAAAGTATCTCTTCATACACAGCATTCTCTCGTATCGTACTTATTCTACGGGCTCTACATGTGAATAACGAGAAGGCAAAGATGTTGCTCAAACCTGACAAAACAATTGTTACTGAACCACATCATATATGGCCAACTTTGAATGATGAACAGTGGTTGAAGGTTGAATGTGCACTAAGGGACCTCATTCTTTCTGATTATGCAAAGAAAAACAATGTCAATACTTCTGCACTGACGCAATCTGAAATTCGAGATATCATACTTGGTGCTGAAATTGCTCCACCATCACAGCAGCGGCAACAGATAGCTGAGATTGAGAAACAGTCTAGAGAGACGACTCAGTTAACTGCTGTTACCACAAGGACAACGAATGTACATGGAGATGAGCTCATTATCACGACAACAAGTCCATACGAGCAACAAGCGTTCGCATCGAAGACTGATTGGCGTGTCAGGGCCATCTCTGCCACAAACTTGTATCTTCGTGTCAATCACATTTATGTCAATTCTGACGATATAAAGGAGACTGGCTACACTTATATTATGCCAAAGAACATACTGAAGAAGTTCATATGCGTAGCAGATCTGCGGACACAAATCGCTGGATTCTTGTATGGGCTGAGTCCACAGGACAATCCTCAAGTTAAAGAGATCAGGTGTATAGCCATTCCACCGCAGCATGGAACTCACCAGATGGTGACCCTGCCAGCAAATCTTCCTGAGCATGAGTTCCTTAATGACCTGGAACCATTGGGATGGATGCATACCCAGCCAAATGAAGCTCCACAGCTATCACCACAGGACCTGACATCACATGCTAAGATTCTGGAGGGCAACAAACAATGGGATGGTGAGAAGTGCATCATTCTGACATGCAGCTTCACGCCAGGATCTTGCTCGTTGACTGCATACAAGCTGACACCAAGCGGTTACGAGTGGGGACGCAGCAACAAGGACAATGGGAGCAACCCGCATGGATACCTCCCAACTCATTATGAGAAGGTCCAGATGCTTCTGAGTGACCGCTTCCTTGGCTTCTATATGGTTCCAGATAACGTCCCTTGGAACTTCAACTTCATGGGGGTGAAGCATGACCCGCTGATGAAGTACAATATGAAGCTGGGCATGCCCCGGGACTTCTACCACGAGGACCACCGGCCAACACACTTCCTGGAGTTTAGCAACATCGAGGAGGGTGAGGTCGCAGAAGGGGATAGGGAGGACACCTTCTCGTAG |
Protein: MWNGAPPPPPPHMAAAPPPPGTTGAGAGQPPPPPPPAGAPQGAKPLTPAELEAQLVEKARKWHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRHVKILYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQLELDSEEDAAVYEWFYDHKPLMKTKLINGPSYRKWHLSLPIMATLYRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVRLGIYHTPMIMYIKTEDPDLPAFYYDPLINPITSTNKVDRRERKVTEEDDDEDFCLPEDVEPLLKSTELYTDTTAAGISLLFAPKPFNMRSGRTRRAEDIPLVSEWFKEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWVKPADSEPPPLLVYKWCQGINNLQDVWDTSDGQCVVMLQTKFEKFFEKIDLTLLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLILGLTRASELAGPPQMPNEFLTYADTKIETRHPIRLYSRYIDKVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWQMSKPSLVSESKDLFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAYNLHSAFGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLYNIYDDWLKSISSYTAFSRIVLILRALHVNNEKAKMLLKPDKTIVTEPHHIWPTLNDEQWLKVECALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEIAPPSQQRQQIAEIEKQSRETTQLTAVTTRTTNVHGDELIITTTSPYEQQAFASKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICVADLRTQIAGFLYGLSPQDNPQVKEIRCIAIPPQHGTHQMVTLPANLPEHEFLNDLEPLGWMHTQPNEAPQLSPQDLTSHAKILEGNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRSNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNVPWNFNFMGVKHDPLMKYNMKLGMPRDFYHEDHRPTHFLEFSNIEEGEVAEGDREDTFS |